Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQTTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVAT-NAQGSHWKQKRKFLPEDIGQAPIVNAPEGGKVD-----LEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH--FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
1SKX Chain:A ((25-313))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTEEQRMMIRELMDAQMKTFDTTFSHFKNFR---LPGVKVSLQLRGEDGSVWNYKPPIFSLLPHMADMSTYMFKGIISFAKVISYFRDLPIEDQISLLKGAAFELCQLRFNTVFNAETGTWEC-GRLSYCLELL--------LEPMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHP--FATPLMQELFGI


General information:
TITO was launched using:
RESULT:

Template: 1SKX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148198 for 1733 contacts (-85.5/contact) +
2D Compatibility (PS) -24988 + (NN) -16048 + (LL) 12888
1D Compatibility (HY) -20400 + (ID) 3200
Total energy: -199946.0 ( -115.38 by residue)
QMean score : 0.559

(partial model without unconserved sides chains):
PDB file : Tito_1SKX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SKX-query.scw
PDB file : Tito_Scwrl_1SKX.pdb: