Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MEKLLRLCCWYSWLLLFYYNFQVRGVYS----------RSQDHPGFQVLASASHYWPLENVDGIHELQDTTGDIVEGKVNKGIYLKEEKGVTLLYYGRYNSSCISKPEQCGPEGVTFSFFWKTQGEQSRPIPSAYGGQVISNGFKVCSSGGRGSVELYTRD--NSMTWEASFSPPGPYWTHVLFTWKSKEGLKVYVNGTLSTSDPSGKVSRDYGESNVNLVIGSEQDQAKCYENGAFDEFIIWERALTPDEIAMYFTAAIGKHALLSSTLPSLFMTSTASPVMPTDAYHPIITNLTEERKTFQSPGVILSYLQNVSLSLPSKSLSEQTALNLTKTFLKAVGEILLLPGWIALSEDSAVVLSLIDTIDTVMGHVSSNLHGS------TPQVTVEGSSAMAEFSVAKILPKTVNSSHYRF---PAHGQSFIQ-IPHEAFH-RHAWSTVVGLLYHSMHYYLNNIWP--------------AHTKIAEAMHHQD-------CLLFATSHLISLEVSP-PPTLSQNLSGSPLITVHLKHRLTRKQHSEATNSSNRVF-VYCAFLDFSSGEGVWSN-HGCALTRG-NLTYSVCRCTHLTNFAILMQVVPLELARGHQVALSSISYVGCSLSVLCLVATLVTFAVLSSVSTIRNQRYHIHANLSFAVLVAQVLLLISFRLEPGTTPCQVMAVLLHYFFLSAFAWMLVEGLHLYSMVIKVFGSEDSKHRYYYGMGWGFPLLICIISLSFAMDSYGTSNNCWLSLASGAIWAFVAPALFVIVVNIGILIAVTRVISQISADNYKIHGDPSAFKLTAKAVAVLLPILGTSWVFGVLAVNGCAVVFQYMFATLNSLQGLFIFLFHCLLNSEVRAAFKHKTKVWSLTSSSARTSNAKPFHSDLMNGTRPGMASTKLSPWDKSSHSAHRVDLSAV |
| 4J5T Chain:A ((1-811)) | AEFMEEYQKFTNESLLWAPYRSNCYFGMRPRYVHESPLIMGIMWFNSLSQDGLHSLRHFATPQDKLQKYGWEVYDPRIGG-------KEVFIDEKNNLNLTVYFVKSKN-------------GENWSVRVQGEPLDPKRPSTASVVLYFSQNGGEIDGKSSLAMIGHDGPNDMKFFGYSKELGEYHLTVKDNF--------------------GHYFKNPEYETMEVAPGSDCSKTSHLSLQIPDKEVWKARDVFQSLVSDSIRDILERP---ADLIPSVLTIRNLYNFNPGN-FHYIQKTFDLTKK----DGFQFDITYNKLGTTQSISTREQVTELITWSLNEINARFDKQFSF-GEGPDS---IESVEVKRRFALETLSNLLGGIGYFYGNQLIDRETEFDESQFTEIKLLNAKEEGPFELFTSVPSRGFFPRGFYWDEGFHLLQIMEYDFDLAFEILASWFEMIEDDSGWIAREIILGNEARSKVPQEFQVQNPNIANPPTLLLAFSEMLSRAIENIGDFMTNNLEANPGLLTEYAKKIYPKLLKHYNWFRKSQTGLIDEYEEILEDEGIWDKIHKNEVYRWVGRTFTHCLPSGMDDYP---RAQPPDVA---ELNVDALAWVGVMTRSMKQIAHVLKL--TQDEQRYAQIEQEVVENLDLLHWSENDNCYCDISIDPEDDEIREFVCHEGYVSVLPFALKLIPKNS--PKLEKVVALMSDPEKIFSDYG--------LLSLSRQDDYFGKDENYW----RGPIW---------MNINYLCLDAMRYYYPEVILD---VAGEAS----NAKKLYQSLKINLSNNIYKVWEEQG------YCYENYSPIDG--------------------------------HGTGAEHFTG------WTALVVNILGRFRSHHHHHH------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -308147 for 6028 contacts (-51.1/contact) +
2D Compatibility (PS) -74734 + (NN) -5696 + (LL) 11456
1D Compatibility (HY) -23600 + (ID) 6250
Total energy: -406971.0 ( -67.51 by residue)
QMean score : 0.186
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