Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNYPLTLEMDLENLEDLFWELDRLDNYNDTSLVENHLCPATEGPLMASFKAVFVPVAYSLIFLLGVIGNVLVLVILERHRQTRSSTETFLFHLAVADLLLVFILPFAV--AEGSVGWVLGTFLCKTVIALHKVNFYCSSLLLACIAVDRYLAIVHAVHAYRHRRLLSIHITCGTIWLVGFLLALPEILFAKVSQGHHNNSLPRCTFSQENQAETHAWFTSRFLYHVAGFLLPMLVMGWCYVGVVHRLR-----------------------------------------------QAQRRPQRQKAVRVAILVTSIFFLCWSPYHIVIFLDTLARLKA-VDNTCKLNGSLPVAITMCEFLGLAHCCLNPMLYTFAGVKFRSDLSRLLTKLGCTGPASLCQLFPSWRRSSLSESENATSLTTF
4XNV Chain:A ((38-382))----------------------------------SFKCALTKT----GFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPKSLGRLKKKNAICISV-LVWLIVVVAISP-ILFY-SGTGVRKNKTITCYDTTSDEY-LRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -284635 for 2201 contacts (-129.3/contact) +
2D Compatibility (PS) -29442 + (NN) -7624 + (LL) 5084
1D Compatibility (HY) -26800 + (ID) 4000
Total energy: -347417.0 ( -157.85 by residue)
QMean score : 0.271

(partial model without unconserved sides chains):
PDB file : Tito_4XNV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XNV-query.scw
PDB file : Tito_Scwrl_4XNV.pdb: