Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MLRNGSIVTEFILVGFQQSSTSTRALLFALFLALYSLTMAMNGLIIFITSWTDPKLNSPMYFFLGH-------LSLLDVCFITTTIPQMLIHLVVRDHIVSFVCCMTQMYFVFCVGVAECILLAFMAYDRYVAICYPLNYVPIISQKVCVRLVGTAWFFGLINGIFLEYISFREPFRRDNHIESFFCEAPI-----VIGLSCGDPQFSLWAIFADAIVVILSPMVLTVTSYV----HILATILSKASSSGRG-----------KTFSTCASHLTVVIFL-----YTSAMFSYMNPHSTHGPDKDKPFSLLYT----IITP----------------MCNPIIYSFRNKEIKEAMVRALGRTRLAQPQSV |
| 4NTC Chain:A ((2-326)) | MSIGKLLSNGALLVDVLIIG-----AGPAGLSTATGLARQLHT-----AVVFDSGVYRNAKTQHMHNVLGWDHRNPAELRAAGRADLTTRYSTIQFQ---NSTIEAIRQVETNQLFEARDNEGH------SWYGRKVVLATGVRDIPL-------DIEGYSECWA--NGIY----------------HCLFCDGYEERGQETVGVLALGPIAN--PARALHLARMALRLSESVTIYTNGNEQLAKEIQQAAEESPVGASGLKFEARPIRRFEKGDVAKTVIVHLGESESKTEGFLVYNPQTEVNGPFAKQ-LALNMTEGGDILTTPPFYETSVPGVFAVGDCATPLKAVTPAVSMGSLAAGGLVAQLQAQAL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NTC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -283030 for 2053 contacts (-137.9/contact) +
2D Compatibility (PS) -29654 + (NN) -15731 + (LL) 4776
1D Compatibility (HY) -2000 + (ID) 2750
Total energy: -328389.0 ( -159.96 by residue)
QMean score : 0.193
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