Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVLNNSEVKLFLLIGIPGLEHAHIWFS-------------IPICLMYLLA---IMGNCTI------LFIIKTEPSLHEPMYY---------FLAMLAVSDMGLSLSSLPTMLRVFLFNAM-------GISPNACFAQEFFIHGFTVMESSVLLIMSLDRFLAIHNPLRYSSILTSNRVAKMGLILAIRSILLVIPFPFTLRRLKYCQKNLLSHSYCLHQDTMKLACSDNKTNVIYGFFIALCTMLDLALIVLSYVLILKTILS-IASLAERLKALNTCVSHICAVLTFYVPIITLAAMHHFAKHKSPLVVILIADMFLLVPPLMNPIVYCVKTRQIWEKILGKLLNVCGR---------- |
| 4D08 Chain:A ((4-342)) | -----DDEYTKLLHDGIQPVAAIDSNFASFTYTPRSLPEDDTSMAILSMLQDMNFINNYKIDCPTLARFCLMVKKGYRDPPYHNWMHAFSVSHFCYLLYKNLELTNYLEDIEIFALFISCMCHDLDHRGTNNSFQVASKSVLAALYSSEGSVMERHHFAQAIAILNTHGCNIFDHFSRKDYQRMLDLMRDIILATDLAHHLRIFKDLQK-MAEVGYDRN--------NKQHHRLLLCLLMTSCDLSDQTKGWKTTRKIAELIYKEFFSQGDLEKAMGNRPMEMMDREKAYIPELQISFMEHIAMP----IYKLLQDLF---PKAAELYERVASNREHWTKVSHKF-TIRGLPSNNSLDFLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D08.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -338523 for 2084 contacts (-162.4/contact) +
2D Compatibility (PS) -30137 + (NN) -9920 + (LL) 1924
1D Compatibility (HY) -9600 + (ID) 2650
Total energy: -388906.0 ( -186.62 by residue)
QMean score : 0.427
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