Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLDSFFSFLLKSLIMALSNSSW--RLPQPSFFLVGIPGLEESQHWIALPLGILYLLALVGNVTILFIIWMDPSLHQSMYLFLSMLAAIDLVVASSTAPKALAVLLVRAQEIGYTVCLIQMFFTHAFSSMESGVLVAMALDRYVAICHPLHHSTILHPGVIGHIGMVVLVRGLLLLIPFLILLRKLIFCQATIIGHAYCEHMAVVKLACSETTVNRAYGLTVALLVVGLDVLAIGVSYAHILQAVLKVPGNEARLKAFSTCGSHVCVILVFYIPGMFSFLTHRFGHHVPHHVHVLLAILYRLVPPALNPLVYRVKTQKIHQ |
| 4Y5J Chain:A ((15-241)) | --------ILPAEILNGLVDSNWKNRLAAVEQLLGEISGFDAKQ-------------AGISQILIRTISGRKPGLKEMNFQVLKFKLDIIRSVAENY---------------PLTTTTVDLVINEIIEKLADAKNGAAAADVLSAFAEAT----------------------------------KLEYVVGKVLSFAFE------------QKSPKVQSEAFNWVNRSIIEFGFQLQPKTLIEDVRKGVQSTN--PTVRASAIQMVGTMSMYMG---KALMMFFDSEKPALKSQIQVEFDKNVGEKPPKPVRGV------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4Y5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -278978 for 1815 contacts (-153.7/contact) +
2D Compatibility (PS) -22830 + (NN) -5877 + (LL) 9444
1D Compatibility (HY) -3600 + (ID) 1800
Total energy: -303641.0 ( -167.30 by residue)
QMean score : 0.294
|
|
|