Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFLNGTSLTPASFILNGIPGLEDVHLWISFPLCTMYSIAITGNFGLMYLIYCDEALHRPMYVFLALLSFTDVLMCTSTLPNTLFILWFNLK-EIDFKACLAQMFFVHTFTGMESGVLMLMALDHCVAICFP-----LRYATILTNSVIAKAGFLTFLRGVMLVIPSTFLTKRLPYCKGNVIP------HTYCDHMSVAKISCGNVRVNAIYGLIVALLIGGF-DILCITISYTMILQ--------------AVVSLSSADARQKAFSTCTAHFCAIVLTYVPAFFTFFTHHFGGHTIPLHIHIIMANLYLL--MPPTMNP----------IVYGVKTRQVRESVIRFFLKGKDNSHNF |
| 4XNV Chain:A ((38-382)) | ---SFKCALTKTGF----------QFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVL-TLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPKSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVS----YIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244509 for 2165 contacts (-112.9/contact) +
2D Compatibility (PS) -30441 + (NN) -6590 + (LL) 472
1D Compatibility (HY) -21600 + (ID) 2650
Total energy: -305318.0 ( -141.02 by residue)
QMean score : 0.118
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