Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MEPRKNVTDFVLLGF--TQNPKEQKVLFVMFLLFYILTMVGNLLIVVTVTVSETLGSPMSFFLAGLTFIDIIYSSSISPRLISDLFFGNNSISFQSFMAQ--LFIEHLFGGSEVFLLLVMAYDRYVAIC----------KPLHYLV----------------IMRQWVCVL------LLVVSWVGGFLQSVFQLSI----IYGLPFCGPNVIDHFFCDMYPLLK--LACTDTHVI------GLLVVANGGLSCTIAFL-LLLIS----YGVILHSLKKLSQKGRQK---------------AHSTCSSHITVVVFFFVPCI-FMCA-----------RPARTFSIDKSVSVFYTVITPMLNPLIYTLRN-SEMTSAMKKL |
| 4Q9T Chain:A ((12-446)) | TKILTETEKYSVTKLSTDLSFLPFEGLVDTALQKALVNDLDHIYIWNYNSIQKDTPICKISLHSSPPICLFTSSINGICIINKKNSQFLYFEDISTINNLAHVLDLKLKDNENITSTINCEPSGIIIATSLGRVLFITIKDSTGKPKLELKQQLIKPQNSFFFRNLDSSKEIISLKKGPIVGKGERLLYITTRGGSLQ-IWQLSINSKSFKRLEINIYEHVLDSLQDLYPFAHGTLAFLDSHPIYSDTSSAHLTLASISNGNEIYYLMITVILDEKTNSFQIFSIYKLNTYFTKSTVDLNHKPQLFIPNALDSIVSPTLSVYVLFNNAVVMTQISSKLDSSFPLRRKWEDIIRFNKDVEIIGSGYST--DSIYVICKDMGVLKIASH-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q9T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -321617 for 2163 contacts (-148.7/contact) +
2D Compatibility (PS) -31343 + (NN) 9535 + (LL) 596
1D Compatibility (HY) -13600 + (ID) 2950
Total energy: -359379.0 ( -166.15 by residue)
QMean score : 0.148
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