Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------MENQNNVTEFILLGLTENLELWKIFSAVFLVM----YVATVLENLLIVVT--IITSQS-LRSPMYFFLTFLSLLDVMFSSVVAPKV--IVDTLSKSTTISL-KGCLTQLFVEHFFGG-VGIILLTVMA--YDRYVAI--CKPLHYTIIMSPRVCCLMV------GGAW---VGGFMHAMIQLLFM------------------------YQIPFC-GPNIIDHFICDLFQLLTLACTDTHILGLLVTL-NSGMMCVAIFL-I-L--IASYTVILCSLKSYSSK-GR------------------HKALSTCSSHLTVVVL-----------FFVPCIFLYMRPVV-THPIDKAMAV-----------------SDS-IITPMLNPLIYTLRNAEVKSAMKKLWMKWEALAGK |
| 4BUC Chain:A ((16-448)) | PRGSHMKIGFLGFGKSNRSLLKYLLNHQEAKFFVSEAKTLDGETKKFLEEHSVEYEEGGHTEKLLDCDVVYVSPGIKPDTSMIELLSSRGVKLSTELQFFLDNVDPKKVVGITGTDGKSTATALMYHVLSGRGFKTFLGGNFGTPAVEALEGEYDYYVLEMSSFQLFWS--ERPYLSNFLVLNISEDHLDWHSSFKEYVDSKLKPAFLQTEGDLFVYNKHIERLRNLEGVRSRKIPFWTDENFATE------KELIVRGKKYTLPGNYPYQMRENILAVSVLYMEMFNELESFLELLRDFKPLPHRMEYLGQIDGRHFYNDSKATSTHAVLGALSNFDKVVLIMCGIGKKENYSLFVEKASPKLKHLIMFGEISKELAPFVGKIPHSIVENMEEAFEKAMEVSEKGDVILLSPGGASFAKRGEHFREIFKRHGGD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -268439 for 1976 contacts (-135.8/contact) +
2D Compatibility (PS) -30699 + (NN) 5454 + (LL) 1032
1D Compatibility (HY) -10400 + (ID) 2750
Total energy: -305802.0 ( -154.76 by residue)
QMean score : 0.165
|
|
|