Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------MEKINNVTEFIFWGLSQSPEIEKVCFVVFSFFYIIILLGNLLIMLT----------VCLSNLFKS--------------------PMYFF----------------LSFLSFVDICYSSVTAPKMIVDLLAKDKTISYVGCMLQLFGVHFFGCT-------------EIFILTVMAYDRYVAIC-------KPLHYMTIMNRETCNKMLLGTWVGGFLHSIIQVALVVQLPFCGPNEIDHYFCDVHPVL----KLACTETYIVGVVVTANSGTIALG--------SFVILLISYSIILVSLRKQSAEGR--RKALSTCGSHIAMVVIFFGPCTFMYMRP-----------DTTFSEDKMVAVFYTIITPML-----------NPLIYTLRNAEVKNAMKKLWGRNVFLEAKGK |
4QIQ Chain:A ((7-470)) | SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVF-VAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMTLATQAVQEIKHSLDRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -236242 for 2195 contacts (-107.6/contact) +
2D Compatibility (PS) -31044 + (NN) -5959 + (LL) 104
1D Compatibility (HY) -20800 + (ID) 3050
Total energy: -296991.0 ( -135.30 by residue)
QMean score : 0.092
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