Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------MEDKNQTVVTEFLLLGLTDHPYQKIVLFFMFLFVYLITLGGNLGMITLIWIDPRLHTPMYFFLR---------HLSFVDICSSSSVVP-----KMLCNIFAEKKDITF-LGCAAQMWFFGLFEAAECFLLAAM-----AYDRYVAICKPLLYTLIMSQQVCMQLVVG--PYAMALISTMTHTIFTFCLPFCGSNII----------------------NHFFCDIFPLLSLACADTWVNKFV--LFVLAGAIGVLSGLII----MVSYICILMTILKIQT------ADGKQKAFFTCFSHLAAVSILY---------GTLFLIYVRPSSSSSLGIYKVISLFYTVVIPMVNPLIYSLRNKEVKDAFRRKIERKKFIIGR |
| 4KPP Chain:A ((2-396)) | DFTKEKFQLLAISSLTLPWLISLAFNYHHPALTQTLLSGLAVVSASFLISWAAETAEMDVPRSFSLAIVALLAVLPEYAVDGYFAWKAGSVGGEYVHYATANMTGANRLLIGIGWSLVAFIAFRTLKSKEVELDDGIRLEIFFLFLATLYAFTLPLKGHISPFDALVFVSLYAIYIYLSTKAEREEVEVGGVPAYLCSLKTETRRLSVVVLFLFAGFTILMSVEAFSEGLLETARIAGIDEFLAVQWIAPLASESPELIVAIYFVRRFRVSASMNALISSKVNQWTLLIGTIAIIYSISAFKLQSLPLDARQSEEVLLTAAQSLFAVAILLDLKISWKEASALFLLFIVQLLFPGVEVRYIISAIY---IILSLPILFA-KRKEIVESFRTVKRLISLE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -299428 for 2326 contacts (-128.7/contact) +
2D Compatibility (PS) -31066 + (NN) -6405 + (LL) 744
1D Compatibility (HY) -16000 + (ID) 2950
Total energy: -355105.0 ( -152.67 by residue)
QMean score : 0.184
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