Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------MARENHSLAAEFILIGFTNYPELKTLLFVVFSAI-------YLVTMVGNLGLVAL-IYVERRLLTPMYIFLGNLALMDSCCSCAVTPKMLENFFSE--DRIISLYECMAQFYFLCLAE-TTDCFLLATMAYDRYVAICHPLQYHTMMSKTLCIRMTTGAFKAGNLHSMIHVGLLLRLTF-CRSNKIHHFFCDILPLYR--LSCTDPSINELMI-----YIFSIPIQIFTIATVLISYLCILLTVFK---MKSKEGRGKAFSTCAS-HFLSVSIFYIC-LLMYIGPSEEGDKDTPVAIFYAIVIPLLNPFIYSLRNKEVINVLKKIMRNY-NILKQTCSIANLFLIY |
3ZPJ Chain:A ((1-356)) | MTTLEEINLLVERGYYEEALAKVYEIEDPIEQVQVLTKIVVTIYQHDGPMEWIPSIMEDAMYIAKKLRDPANKAVAYSIIASTLAIMEYEEDAMDFFNRAIDEANEIESPIEKGMVLSTLAYHLAIAGYPDNALEIFNIAFDTIIGAETSYTHKVDGILRIGDLLEKAGDTLPSNEAMDFYKMAFDIFDKLHVNQRAAIVEKKIELAKTVYDVGLPQIRAALLKGKNHYALAIIKKKYSGVMRLIGELEVALWMKRVNNMEYLDVVDKAFECCESPRFTDVNVQHIARLLTELGNLRRALKFAKEIQNIHKRSEALKAIALELVRRKKFEEVKKIIESIPDPKIREEALNEIGTIE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ZPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -327540 for 2517 contacts (-130.1/contact) +
2D Compatibility (PS) -32589 + (NN) 27 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 2300
Total energy: -365202.0 ( -145.09 by residue)
QMean score : 0.305
|
|
|