Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEVNIIYVTVFILKGITNRPELQAPCFGVFLVIYLVTV------LGN--LGLITLIKIDTRLHTPMYYFLSHLAFVDLCYSSAITPKMMVNFVVERNTIPFHACATQLGCFL--TFMITECFLLASMAYDCYVAICSPLHYSTLMSRRVCIQ------------LVAVPYIYSFLVALFHTVITFRLTYCGPNLINHF-YCDDLPFLALSCSDTHMKEILIFAFAGFDMI----------SSSSIVLTSYIFI------IAAILRIRSTQGQHKAISTCGSHMVTVTIFYGTLIF----MYLQPKSNHSLDTDKMASVFYTVVIPMLNPLIYSLRNKEVKDASKKALDKGCENLQILTFLKIRKLY------- |
| 1D2R Chain:A ((1-326)) | ------------------------------MKTIFSGIQPSGVITIGNYIGALRQFVELQH-EYNCYFCIVDQHAITV----------WQDPHELRQNIRRLAALYLAVGIDPTQATLFIQSEVP---AHAQAAWMLQCIVYIGELERMTQFKEKSAGAAAAAAGLLTYPPLMAADILLY----NTDIVPVGEDQKQHIELTRDLAERFNKRYGELFTIPEARIPKVGARIMSLVDPTKKMSKSDPNPKAYITLLDDAKTIEKKIKSAVTDSEGTIRYDKEAKPGISNLLNIYSTLSGQSIEELERQYEGKGYGVFKADLAQVVIETLRPIQERYHHWMESEELDRVLDEGAEKANRVASEMVRKMEQAMGLGR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D2R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -283027 for 2053 contacts (-137.9/contact) +
2D Compatibility (PS) -27987 + (NN) 2586 + (LL) 4164
1D Compatibility (HY) 4400 + (ID) 1800
Total energy: -301664.0 ( -146.94 by residue)
QMean score : 0.248
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