Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGE--------------NVTKVSTFILVGLPTAPGLQYLLFLLFLLTYLFVLVENLAIILIVWSSTSLHRPMYYFLSSMSFLEIWYVSDITPKMLEGFLLQQKRISFVGCMTQLYFFSSLVCTECVLLASMAYDRYVAICHPLRYHVLVTPGLCLQLVGFSFVSGFTISMIKVCFISSVTFCGSNVLNHFFCDISPI-LKLAC--------TDFSTAELVDFILAFIILVFPLLATILSYWHITLAVLRIP-----SATGCWRAFSTCASHLTVVTVFYTALLFMYVRPQAIDSQSSNKL------ISAVYTVVTPIINPLIYCLRNKEFKDALKKALGLGQTSH-------------------- |
| 1U19 Chain:A ((4-349)) | MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLL-IMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS--------------NFRFGENHAIMGVAFTWVMALACAAPPLVG--WSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVH-FIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -262327 for 2310 contacts (-113.6/contact) +
2D Compatibility (PS) -29316 + (NN) 3697 + (LL) 1764
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -291782.0 ( -126.31 by residue)
QMean score : 0.193
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