Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGVKNH-STVTEFLLSGLTEQAELQ---LPLFCLFLGIY------TVTVVGNLSMI-SIIRLNRQLHTPMYYFLSS-LSFLDFCYSSVITPKMLSGFLCRD-------RSISYSGCMIQLFFF--CVCVISECY-------MLAAMACDRYVAICSPLLYR--------VIMSPR--------------V-C-SLLVAAVFSVGFTDAVIHGGCILRLSFCGSNIIKHYFCDIVPLIKLSCSSTYIDELLI--FVIGGFNMVATSLTIIISYAF---ILTSILRIHSKK-------------GRCKAFST--CSSH------------LTAVLM--FYGSLMSMYL-KPASS-SSLTQEKV--------SSVFYTTVILMLNPLIYSL-RNNEVRNALMKLL---------RRKISLSPG |
| 4QT9 Chain:A ((19-432)) | LSDDALMDTVQRRTFLYFWEGAEPNSGLAPERYHVDGVYPQNDANVVTSGGSGFGIMAILAGIDRGYVTREEGLARMERIVSFLEKADRFHGAYPHWWYGDTGKVKPFGQKDNGGDLVETAFLMQGLLAVHQYYANGNDKEKAIAQRIDRLWREVDWDWYRKGGQNVLYWHWSPTYGWEMDFPIHGYNECMIMYILAAASPTHGVPAAVYHDGWAQ-----NGAIVSPHKVEGIEL-HLRYQGTEAGPLFWAQYSFLGLDPVGLKDEYCPSYFHEMRNLTLVNRAYCIRNPKHYKGFGPDCWGLTASYSVDGYAAHSPNEQDDKGVISPTAALSSIVYTPEYSLQVMRHLYNMGDKVFGPFGFYDAFSETDNWYPQRYLAIDQGPIAVMIENYRTGLLWKLFMSHPDVQAGLTKLGFNTN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -318309 for 2376 contacts (-134.0/contact) +
2D Compatibility (PS) -31036 + (NN) -439 + (LL) 640
1D Compatibility (HY) -7200 + (ID) 3050
Total energy: -359394.0 ( -151.26 by residue)
QMean score : 0.243
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