Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------MLGSKPRVH--LYILPCASQQVSTMGDRGT-------SNHSEMTDFIL---AGFRVRPELHILLFLLFLFVYAMIL---------LGNVGMMTIIMTDPRLNTPMYFFLGNLSFIDLFYSSVIEP-----------KAMINFWSENKSISFAGCVAQLFLFALLIVTEGF---------------------LLAAMAYDRFIAICNPLLYSVQMSTRLCTQLVAG----SYFCGCISSVIQTSMTFTLSF-------CASRAVDHFYCDSRPLQ--RLSCSDLFIHRMISFSLSCIIILPTIIVIIVSYMYIVSTVLKIHSTEGHKKAFSTCSSHLGVVSVLYGAVFFMYLTPDRFPELSKVASLCYSLVT--PMLNPLIYSLR----------NKDVQEALKKFLEKKNIIL------------------------------------------------------------------ |
| 1Q19 Chain:A ((2-501)) | SNSFCVVYKGSDTDINNIQRDFDGKGEALSNGYLFIEQNGHYQKCEMERGTAYLIGSLYNRTFLIGLAGVWEGEAYLANDAELLALLFTRLGANALALAEGDFCFFIDEPNGELTVITESRGFSPVHVVQGKKAWMTNSLKLVTAAEGEGALWFEEEALVCQSLMRADTYTPVKNAQRLKPGAVHVLTHDSEGYSFVESRTLTTPASNQLLALPREPLLALIDRYLNAPLEDLAPRFDTVGIPLSGGLDSSLVTALASRHFKKLNTYSIGTELSNEFEFSQQVADALGTHHQMKILSETEVINGIIESIYYNEIFDGLSAEIQSGLFNVYRQAQGQVSCMLTGYGSDLLFGGILKPGAQYDNPNQLLAEQVYRTRWTGEFATHGASCYGIDIRHPFWSHSLISLCHALHPDYKIFDNEVKNILREYADSLQLLPKDIVWRKKIGIHEGSSVNQAFANVLGSTVDNYQTKSRFTYRVYQAFLRGRLSITDVTPSQLKDLIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -255155 for 2474 contacts (-103.1/contact) +
2D Compatibility (PS) -34549 + (NN) -1352 + (LL) 0
1D Compatibility (HY) 0 + (ID) 1800
Total energy: -292856.0 ( -118.37 by residue)
QMean score : 0.192
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