Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MALTPESPSSFPGLAATGSSVPEPPGGPNATLNSSWASPTEPSSLEDLVATGTIGTLLSAMGVVGVVGNAYTLVVTCRSLRAVASMYVYVVNLALADLLYLLSIPFIVATYVTKEWHF--GDVGCRVLFGLDFLTMHASIFTLTVMSSERYAAVLRPLDTVQRPKGYRKLLALGTWLLALLLTLPVMLA-MRLVRRGPKSLCLPAW----GPRAHRAYLTLLFATSIAGPGLLIGLLYARLARAYR--RSQRASFKRARRPGARALRLVLGIVLLFWACFLPFWLWQLLAQYHQ-APLAPRTARIVNYLTTCLTYGNSCANPFLYTLLTRNYRDHLRGRVRGPGSGGGRGPVPSLQPRARFQRCSGRSLSSCSPQPTDSLVLAPAAPARPAPEGPRAPA |
1U19 Chain:A ((4-349)) | --MNGTEGPNF--------YVPFSN--KTGVVRSPFEAPQ--YYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFG-GFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSA----VYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEAST--------TVSKTETSQVAPA------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199446 for 2763 contacts (-72.2/contact) +
2D Compatibility (PS) -34725 + (NN) -15195 + (LL) 1372
1D Compatibility (HY) -5600 + (ID) 1050
Total energy: -254644.0 ( -92.16 by residue)
QMean score : 0.207
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