Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRESDVEAQQSHGSSACSQPHGSVTQSQGSSSQSQGISSSSTSTMPNSSQSSHSSSGTLSSLETVSTQELYSIPEDQEPEDQEPEEPTPAPWARLWALQDGFANLECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGTFVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA-GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENESTALPQVLAQPSTSRKRPREGEAEGAETTKRPAVCAAVL |
4PDS Chain:B ((26-302)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGIFKDFSII------------------------ATVKKAIERTTGKTFSVKII------------------VTRELEVLQKLNHPRIVRLKGFY----YYMVMEFVSGGDLMDFVAAHGAVGEDAGREISRQILTAIKYIHSMGISHRDLKPDNILI-EQDDPVLVKITAFGLAKV------------TLAYVAPEVI------NEYSSLVDMWSMGCLVYVILTGHLPFS-GSTQDQLYKQIGRGSYHEGPLKDFRISEEARDFIDSLLQVDPNNRSTAAKALNHPWIKMSPLYGDFSQISLSQSLSQQKLL--------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4PDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -178672 for 1785 contacts (-100.1/contact) +
2D Compatibility (PS) -23891 + (NN) -12173 + (LL) 13444
1D Compatibility (HY) -22000 + (ID) 4900
Total energy: -228192.0 ( -127.84 by residue)
QMean score : 0.533
|
|
|