Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFQASMRSPNMEPFKQQKVEDFYDI----GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGV-SREEIEREVSILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRWKLSFSIVSLCNHLTRSLMKKVHLRPDEDLRNCESDTEEDIARRKALHPRRRSSTS |
| 3LM0 Chain:A ((21-295)) | ----------------QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKR-----RRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNI-LLSSIYPLGDIKIVDFGMSRKI---------MGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHP-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149534 for 1967 contacts (-76.0/contact) +
2D Compatibility (PS) -27123 + (NN) -6500 + (LL) 8040
1D Compatibility (HY) -30400 + (ID) 6500
Total energy: -212017.0 ( -107.79 by residue)
QMean score : 0.507
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