Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVCDMSNEQFMSCQPAAAKTTDPPAAPSQACCDALAGADLKCLCGYKNSPWMGVYNIDPKRAMELPAKCGLATPPDC
M048 Chain:A ((1-139))
AVCDMSNEQFMSCQPAAAKTTDPPAAPSQACCDALAGADLKCLCGYKNSPWMGVYNIDPKRAMELPAKCGLATPPDC
General information:
TITO was launched using:
RESULT:
Template:
M048.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28619 for 547 contacts (-52.3/contact) +
2D Compatibility (PS) -8250 + (NN) -9508 + (LL) 0
1D Compatibility (HY) -9600 + (ID) 3850
Total energy: -59827.0 ( -109.37 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_M048.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M048-query.scw
PDB file :
Tito_Scwrl_M048.pdb
: