Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VDAMTCQQAITTLMPCQPFLTGAAPAPTVPCCLAVSNVNTAATTTQARRDLCECFEKAAPGFGVKPEKAKQLPQLCGVTVPVPIDPTINCKDIQ
M048 Chain:A ((3-126))
VDAMTCQQAITTLMPCQPFLTGAAPAPTVPCCLAVSNVNTAATTTQARRDLCECFEKAAPGFGVKPEKAKQLPQLCGVTVPVPIDPTINCKDIQ
General information:
TITO was launched using:
RESULT:
Template:
M048.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6210 for 682 contacts (9.1/contact) +
2D Compatibility (PS) -9392 + (NN) -5793 + (LL) 0
1D Compatibility (HY) 2400 + (ID) 500
Total energy: -7075.0 ( -10.37 by residue)
QMean score : 0.089
(partial model without unconserved sides chains):
PDB file :
Tito_M048.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M048-query.scw
PDB file :
Tito_Scwrl_M048.pdb
: