Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DDDATLDCDSQVNGLAGNCMTAVLIGTKPSSKCCKFVRSAQLDCLCPKITKDVTKMITERLLSTALKIAKQCNWELPHNYQCGSYTFP
M048 Chain:A ((1-281))
DDDATLDCDSQVNGLAGNCMTAVLIGTKPSSKCCKFVRSAQLDCLCPKITKDVTKMITERLLSTALKIAKQCNWELPHNYQCGSYTFP
General information:
TITO was launched using:
RESULT:
Template:
M048.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42470 for 722 contacts (-58.8/contact) +
2D Compatibility (PS) -8990 + (NN) -3295 + (LL) 0
1D Compatibility (HY) -12800 + (ID) 4400
Total energy: -71955.0 ( -99.66 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_M048.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M048-query.scw
PDB file :
Tito_Scwrl_M048.pdb
: