Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
YCFLADIQPCIPAIKATGPRQAPTAACCDSISKTSQVCLCQAVSGPETPRAGLSVGKALVLPLECGINVPSGTTCAKFFLVVFDLVFA
M048 Chain:A ((1-163))
YCFLADIQPCIPAIKATGPRQAPTAACCDSISKTSQVCLCQAVSGPETPRAGLSVGKALVLPLECGINVPSGTTCA------------
General information:
TITO was launched using:
RESULT:
Template:
M048.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30607 for 540 contacts (-56.7/contact) +
2D Compatibility (PS) -7916 + (NN) -5458 + (LL) 1588
1D Compatibility (HY) -10400 + (ID) 3800
Total energy: -56593.0 ( -104.80 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_M048.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M048-query.scw
PDB file :
Tito_Scwrl_M048.pdb
: