Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARNYYEILEY---VAPEEINKAYKRLGLKCHPDKLLP----KKRKISRIVKKAINGAALSKLELEEMQSL
2LGW Chain:A ((2-61))
--ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEV-AEAYE--VLSDKHKREIYDR
General information:
TITO was launched using:
RESULT:
Template:
2LGW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6410 for 302 contacts (-21.2/contact) +
2D Compatibility (PS) -5485 + (NN) -3174 + (LL) 516
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -18303.0 ( -60.61 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_2LGW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LGW-query.scw
PDB file :
Tito_Scwrl_2LGW.pdb
: