Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEVVTFGCRLNFYESELIKEALRKAERENVVVVHSCAVTNEAERQVKQKIRKIYKNDPNKEIIVVGCAVQLDPESYSNIPGVSKVLGNQDKLKTENYLLSNNKILVNDNQASKSEPALIDKFKDKSRAFIEVQNGCDHSCTFCSITEARGNNRSVPINNIIEQIKIFVANGYQEVVFTGVDITDFGTDLFGKPSLGLMVRRVLKDVPELKRLRLSSIDVAEVDDELMDLIVNESRFMPHLHLSLQSGNNLILKRMKRR--HSREQVIEFCHKVKSLRSNIAYGADIIAG--FPTE---TDEMFQDTVNLLEETNTVYLHAFPYSKRKNTPAARMPQVPENVRKERVKNLRKINKAMMSNFYQSLIGTKQSVLVEQNNIGRAENFALVKFTSKIQAKSIVKATIIGMESGYLVGSIIP |
| 1YDO Chain:A ((24-176)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------WIATEDKITWINQLSRTGLSYIEITSF---VHPKWI---PALRDAIDVAKG-IDREKGVTYAALVP---NQRGLENAL--EGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKAN--LTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMGITVFDGSAGGLGGCPYAPGSSGNAATEDIVYMLEQMDIKTNVKLEKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80437 for 1103 contacts (-72.9/contact) +
2D Compatibility (PS) -15307 + (NN) -5042 + (LL) 10604
1D Compatibility (HY) 800 + (ID) 800
Total energy: -90182.0 ( -81.76 by residue)
QMean score : 0.384
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