Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYSAVIVKPKRNVFAVLDIGTTKIICLIVKVSGNFNYKITGTGYKIAEGINGGLITDIKYASYSISSTIGLAEQVSEETIDQIYVNIAGCGI-LSFNVHNEIIAANHEISDRDIKRVIFQTFEKYIEENVIIHNIPLRYHLDDMTDIREVSGLYGKRLSADVNVVTASR---PALTNIENCITNNSG--ISMAGCIASAYSAGFACLSEDEKELGTAIVDIGGGCTAIGIFKRSKLIYANSIPIGGV-HITRDIAYGLCTSIEHAERIKILYGSTVVTSIDENEYITVQSNENDEQARIPKSELVDIIRPRIEEILELVKEQFRKQKDPINKVVITGGTSRLASMKEIASYIFNKQ---VRIGCPESYGGLDGEYNKNPVFSAAIGSIKLI-----VDTFYKNNPD--MLGQDGKISKLYHWVKSKVTV |
| 3WL8 Chain:A ((23-358)) | ---------------------VKWEC--------------PAGYEVKEGLNV----DFPHKGMKRAFIVYPAKNVSGP--APVWVPMTGSVESTNDNLTVARSGANSILADHGY--------------TVIA---PVRACANQDPNIRGERCNGPGSNGWNWNPWFEGRAADPSGEHWKNDEGPDSSFFVAMVQCVGTKYK-------LDARRLFLGGIASGGTMTNRALLFRSNF-WAGGLPISGEWYVTSD------------------DGTPL--SFDDARAAVAAAPTKIHQGRVGPYPLPAKVGPLIVMTVWGGEKDLWNCTRPDGSRFLCAD---YRPSTQAGSNFFSAQPDVVHVACSSTHGHMWPQLNTQEFNRWALDTLASHPKGSDPRSFKLTQPPEGYTCHVGPFTGLYASAWS---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -60395 for 2865 contacts (-21.1/contact) +
2D Compatibility (PS) -32664 + (NN) 5156 + (LL) 8616
1D Compatibility (HY) -6000 + (ID) 3350
Total energy: -88637.0 ( -30.94 by residue)
QMean score : 0.150
|
|
|