Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAAHCYIKKLKLSNFRNHLNFELDSDDS-SVVIIGKNGIGKTNILEAISLLAKSNGMKKAKASEMQNRFSNKDWAVHYDFFNGADLNSIGIAKSFNKKLIQIGGKMQSSYSSLYRISNVIWLIPQMDYILLNSPSDRLKFLDRIVSLFEENYACYYMRYRKAKRERGRLLRENILNKSWLSSLENIMAVNAVNILDMRLSVLKMLQDTINSYSTQFFPKVSLKFNSQLTLSDTAKYFQNRLRENREKDSLTGRITFCVNNDKFQVFCQRRDLPINLCSTGEQKLLLLSIILSSVKARCIHYNKAPLLLLDDIMSHLDKYYRKVLIEEMLSI--RCQAWITDVDQNNFGNYIDYFKTIEL |
3B60 Chain:A ((358-552)) | ----------------ALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDID------EGH-----------------------------------ILMDGHDL-REYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEY--------------------------------------------------------------------------------------SREQIEEAARMAYAMDFINKM----DNGLDTIIGENG-----VLLSGGQRQRIAIARALLR---------DSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTI-EQADEIVVVED |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B60.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44520 for 1469 contacts (-30.3/contact) +
2D Compatibility (PS) -20506 + (NN) -5630 + (LL) 12256
1D Compatibility (HY) -800 + (ID) 1550
Total energy: -60750.0 ( -41.35 by residue)
QMean score : 0.313
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