Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------MHSKPPWLRAKAPTGEIFNETLNTVKLHGLHTVC-----------EEAACPNIGECW---------------------------NKRHATVMILGSVCTRACAFCNVATGIPNKLDPHEPENLAKAIKKLNLKYV-VITSVDRDDLPDG----GASQFIKCIEEIRKITPETTVEILT--PDFLNKKGAFEAIAVASPDVYNHNIEMV---PRLYARIRPRARYFHSLYLLKMVKQINPKLLTKSGLMVGL-GETKEEVLQVMDDLRSAEVDFITIGQY-----------------LQPTPKHAKIDRYVTPEEFEHYKYIAYSKGFLVVASSP----LTRSSYHA--------------EEDFNRLKACR-------------- |
| 4JC0 Chain:A ((2-433)) | RVGIKVLGCPKNEADCEVLAGVLREGGHEIVFDVKDADVVVLDTCAFIEDAKRESIDEIFSFVDAKDQYGYKLVVKGCLVQRYYEELKKEIPEVDQWIGVADPEEIANAIETDLVPDRYRKRIDLEERPYAYVKISDGCDRGCTFCSIPS-FKGSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVMYLHPDHLT-EEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDEEGTVAFNLKEKVDPEMAKRRQEELLLLQAEISNSRLDRFVGKKLKFLVEGKEGKFLVGRTWTEAPEVDGVVFVRGKGKIGDFLEVVIKEHDEYDMWGSVILEH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4JC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -79217 for 1974 contacts (-40.1/contact) +
2D Compatibility (PS) -30535 + (NN) -8121 + (LL) -108
1D Compatibility (HY) -12800 + (ID) 2000
Total energy: -132781.0 ( -67.26 by residue)
QMean score : 0.341
|
|
|