Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRIQRNKIKVEIKKLSHGKDLPLPCYATMQSAGMDLYAALGNSIVLNPLERLLIPTGIVIVIPNGFEGQIRPRSGLAAKYGITVLNSPGTIDSDYRGEVKVCLINLSNQPYEIKRGDRIAQILIAPVFRVIWDDAERLCTEETERSAGGFGSSGR
2HQU Chain:B ((38-163))
------------------------PTRGSARAAGYDLYSAYDYTI--PPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFIDV--GAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQAL--DDTERGSGGFGSTGK
General information:
TITO was launched using:
RESULT:
Template:
2HQU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56738 for 767 contacts (-74.0/contact) +
2D Compatibility (PS) -13131 + (NN) -3251 + (LL) 2232
1D Compatibility (HY) -10400 + (ID) 2800
Total energy: -84088.0 ( -109.63 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_2HQU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HQU-query.scw
PDB file :
Tito_Scwrl_2HQU.pdb
: