Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDFAVRYKITIEYNGSSFSGWQKQQHSANSIQETIENAIFNFSGEKVTLHCGGRTDAGVHALGQVAHFDMERKFELYKIRNAINYHLKSIPIVVLNAETVDNTFHSRFSAKKRYYEYRIINRYAPAALEAGYAWQVFNPLDVNIMREAAKYLLGKHNLLSFRSKDCQATNPIRTIDDIDIVQNGSHIYIKISAISFLHNQVRIIVGTLVEFGKSRTNPQKMLNILNQCKRNAAGVTAPPFGLYLAKIDY
1DJ0 Chain:A ((2-246))
--PVYKIALGIEYDGSKYYGWQRQNEV-RSVQEKLEKALSQVANEPITVFCAGRTDAGVHGTGQVVHFETTALRKDAAWTLGVNANLP-GDIAVRWVKTVPDDFHARFSATARRYRYIIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGENDFTSFRAVQCQSRTPWRNVMHINVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATAKAEGLYLVAVDY
General information:
TITO was launched using:
RESULT:
Template:
1DJ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -172695 for 2032 contacts (-85.0/contact) +
2D Compatibility (PS) -25911 + (NN) -6495 + (LL) 248
1D Compatibility (HY) -15600 + (ID) 4450
Total energy: -224903.0 ( -110.68 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_1DJ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DJ0-query.scw
PDB file :
Tito_Scwrl_1DJ0.pdb
: