Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKSAYEIVEHEYDVVVVGAGGAGLRATLGMAATNFSVACISKIFPTRSHTVAAQGGISAALGNIAEDDWRWHAYDTIKGSDWLGDQDAIEYMCKNAAKAVIELENFGVPFSRTGNGKIYQRPFGGMTTHFGKGKSAQRTCAAADKTGHAILHTLYQQCLKFNTEFFVEYFVIDLIIDNETGACCGVLAWSLCEGTLHKFRAHSVVLATGGYGRVYFSATSAHTCTGDGNGMVVRAGLPLEDMEFVQFHPTGIYGSGCLMTEGCRGEGGYLVNSQGERFMERYAPKVKDLASRDVVSRAITIEIREGRGVGPKKDHIYLTIAHLDPEIIKLRLPGISETARTFAGVDVTKDPIPVIPTVHYNMGGIPTNYHGEVVTL-KESKEEVVEGLFAIGEAACISVHGANRLGSNSLLDLVVFGRAAALRAKKKLKPNMPHKKLNSACIDWIVDRFNKMRFASGGLRVSKIRSEMQHTMQKYASVFRVAEVLEEGKRAIKGVAKMMPDIAIEDRSMVWNSDLVEALELANMIPQAVITMECAANREESRGAHAREDFPERDD-----------------KNWMKHTIAWLEEKEGQINTRIDYKKVAENTLSD-EIDFIAPEKRVY |
| 3VRA Chain:E ((33-645)) | ---AQYKVIDHAYDVVIIGAGGAGLRAAMGLGEAGFKTAVVTKMFPTRSHTTAAQGGINAALGSMNPDDWKWHFYDTAKGSDWLGDQNAMHYLTRNAVEAVTELENFGMPFSRTPEGKIYQRSFGGQSNNYGKGGVAKRTCCVADRTGHSMLHTLYGNSLRCHCTFFIEYFALDLLMDK--GRCVGVIALCLEDGTIHRFRSKRTIVATGGYGRAYFSCTTAHMNTGDGTALATRAGIALEDLEFIQFHPTGIYGVGCLITEGSRGEGGFLVNSEGERFMERYAPKAKDLASRDVVSRAETIEIMEGRGVGPEKDHIYLQLHHLPAEQLHQRLPGISETAKIFAGVDVTKEPIPVIPTVHYNMGGIPTNYKAQVIKYTKEGGDKIVPGLYACGECACHSVHGANRLGANSLLDAVVFGRACSINIKEELKPDEKIPELPEGAGEESIANLDAVRYANGDVPTAELRLTMQKTMQKHAGVFRRGDILAEGVKKMMDLSKELKRLKTTDRSLIWNSDLTESLELQNLMLNATQTIVAAENRKESRGAHARDDFPKREDEYDYSKPIEGQTKRPFEKHWRKHTLTKQDPRTGHIT--LDYRPVIDKTLDPAEVDWIPPIIRSY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VRA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -374707 for 5832 contacts (-64.3/contact) +
2D Compatibility (PS) -63707 + (NN) -22234 + (LL) 500
1D Compatibility (HY) -50000 + (ID) 17350
Total energy: -527498.0 ( -90.45 by residue)
QMean score : ?
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