Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAISLLQGKKGLITGIINKRSIAYGIVKTLSEHGAESAVTYQNEIVKERLLSIAAELNVELVLNCDVANEGTIDDVFKSIEEKWGTLDFLVHAIAFSDKNELSGKYVNT-SLNNFQNAMNISCYSFTALAQRAEKMMPNGGSLLTLSYYGAEKVMPNYNVMGLCKAALEASVKYLACDLGPQNIRVNAISAGPIRTLASSGISDFHFISEWNRNNSPLRRNTTLEDVGKAALYLLSDLSSGTTGEILHVDSGYNVVGMKAIDSNIINSYQN
4D46 Chain:A ((2-256))
---GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPI------------------EAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMN------------
General information:
TITO was launched using:
RESULT:
Template:
4D46.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163242 for 1981 contacts (-82.4/contact) +
2D Compatibility (PS) -25495 + (NN) -8842 + (LL) 2304
1D Compatibility (HY) -23200 + (ID) 5800
Total energy: -224275.0 ( -113.21 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_4D46.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4D46-query.scw
PDB file :
Tito_Scwrl_4D46.pdb
: