Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNYRFGTKVLIIGSGAAGYAAAIYAARANLEPVVV--TGMQPGGQLTITMGVENYPGFVSI-QGPELMKQMRLHVEKVGAEIVNDEIKSVEQLEYSNEYKFRSSGNNDDYYSNAVIIAAGSQAKWLGLESERKFQGYGVSACATCDGAFFRNKIVAVIGGGNTAVEEAIFLTRFAKEVILIHRRDKLRAEKIMQDRLFANNKIKVIWNHTVEQVLGEENPKKVTGITIKSTKIDEIQELRVNGVFIAIGHAPNTGVFKS-----FIEMDEQGYIITKPGTTLTSRAGVFAAGDVQDKVYRQAVVAAGTGCMAALDAEKFLECTSK |
2Q0L Chain:B ((6-309)) | -----------IIGGGPAGLSAGLYATRGGVKNAVLFEKGM-PGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFG---LKHEMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAPITLEHAKNNDKIEFLTPYVVEEIKGDAS--GVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDF-SMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYLEHH-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Q0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -220302 for 2517 contacts (-87.5/contact) +
2D Compatibility (PS) -32366 + (NN) -15055 + (LL) 1260
1D Compatibility (HY) -21200 + (ID) 5750
Total energy: -293413.0 ( -116.57 by residue)
QMean score : 0.465
|
|
|