Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLNEQPDVLTFLNSNLKGISKFHFGILSKLCGGNKVMDLLFYRPLSYVDRSKSLLDARVGELTTFIAKIYEHQPPTFRGRPYKIVVESKSQYIFIVFFNYSIKYLYKLFPIGANVIISGKLEKFAEHWQVTHPDYVLLDTNQFEEIARVEPVYQLCRGITNKSIRNIINSNLKELPDLPEWIGDTLIKQNKWLSWKESIIKLHRPNSLAEAEICRRRLAYDELFAYQMALKLARENHVRKRGREFTISNKYKEQVLNELSF-QLTNDQIRAIDEISERQKSKCRMVSLLQGDVGSGKTVVALFAMLNVIENNMQAALMAPTTILAEQHYNWIEEALSYTDIKIALLTGKTTRKERKIITNELASGILKIIIGTHALFQA-----NVTFKNLGLAVIDEQQRFG---VIQRNCLV------GKGENADILFVTATPIPRTLQQAIY-GDVECSILREKPKSRLPIKTVAMNIK-KLVEVIEKLKSAINRGEKAYWICPCIGGNEGLNIAAAEMRFQELQKTFFN-KVGIIHGKLTQVQKDQVMFSFKRNEFPLLVATTVIEVGIDVPDATIMIIENAEQFGLSQLHQLRGRVGRGNKPSFCVLLYNNISKSSFSKLKIMCESQDGFYIAEKDMMLRGSGDILGLKQSGCMEFKFADLYKDRELLNLAYNNTKSAIAENKSFELLLDIFEYRSRLHFSKFQ |
| 1OYW Chain:A ((12-344)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAKQVLQETFGYQQFRPGQEEIIDTVLSGR------DCLVVMPTGGGKSLCYQIPALLL---NGLTVVVSPLISLMKDQVDQLQANG----VAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQE--QRGKSGIIYCNSR--------AKVEDTAARLQS--KGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPR-NIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190246 for 2516 contacts (-75.6/contact) +
2D Compatibility (PS) -34389 + (NN) -11527 + (LL) 19740
1D Compatibility (HY) -9600 + (ID) 2900
Total energy: -228922.0 ( -90.99 by residue)
QMean score : 0.424
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