Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLNLFNNNQVDYSRQNYIILDENKHIYNAVINDLSWKYLFLFGPKGSGKTHLAH-IWQSINNAIFIN-----------VNNFISEIRYSNAFILEDVQDIQDEATLLHCYNYMKENNKRLLITSSTSPKRLNFKLKDLSSRILST--------------ISAKIPSASEELLRIMLIKRFSDKQLKVDLKVINYILARIERSFCSINRIIEKIDNGSMGSN---VTIPFVSTLLKRDTT------------------------------------------------------------------------------ |
| 1HQC Chain:A ((5-318)) | ---ALRPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKPGDLAAILANSLEEGDILFIDEIHRLS-RQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRGTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAALGLDELGLEKRDREILEVLILRFGGGPVGLATLATALSEDPGTLEEVHEPYLIRQGLLKRTPRGRVPTELAYRHLGYPPPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114443 for 1588 contacts (-72.1/contact) +
2D Compatibility (PS) -21569 + (NN) -4315 + (LL) 428
1D Compatibility (HY) -3200 + (ID) 1550
Total energy: -144649.0 ( -91.09 by residue)
QMean score : 0.408
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