Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMLDKENPIIKEFEEAGAILH---GHFVLSSGLHSDTYTQCAKIFENPSRAMKVCELLANKIKKELNSSIDLILSPAIGGIIVGYEIGRQLRMKTMFCER--VNGKFELRRGFEIKRGEKILLVEDVITTGKSSLEAVKCAEDMGGKVVAEASLIKRNSE-----TK-LPFSIISLLELSI-KNYSEAELPEELKKLPIIKPGSREYLSNCSK |
| 3DEZ Chain:A ((36-227)) | ---TLAKDIARDLLDIKAVYLKPEEPFTW---IKSPIYTDNRITLSYPETRTLIENGFVETIKEA-FPEVEVIAGTATAGIPHGAIIADKMNLPLAYIRSKPK----NQIEG-RVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKASVKLVTLSNYSELIKVAKVQGYIDADGLTLLKKFKENQETWQD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DEZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65619 for 1374 contacts (-47.8/contact) +
2D Compatibility (PS) -18386 + (NN) -1038 + (LL) 792
1D Compatibility (HY) -7200 + (ID) 1600
Total energy: -93051.0 ( -67.72 by residue)
QMean score : 0.439
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