Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MSRLIR-M-SVLASGSTGN-------ATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQ-----------LPIYANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFY-IFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESN-HDVDMLRMCRYPWKTKQRILGDMGHV-SNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLNEHDIDTEKEVLLCDTDKAIPTPIYTI |
1ZKP Chain:A ((18-268)) | LYFQSNAMKMTVVGFWGGFPEAGEATSGYLFEHDGFRLLVDCG--SGVLAQLQKYIT--PSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQLPELPIYGHTFDENGFHSLTHEPHTKGIPY-NPEETLQIGPFSISFLKTVHPV--TCFAMRITAGNDIVVYSADSSYIPE-FIPFTKDADLFICECNMYAHQEA---------------AKAGHMNSTEVASIAKDA---NVKELLLTHLPHTGNPADLVTEAKQIF--------SGHITLAHSGYVWNS----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63303 for 1934 contacts (-32.7/contact) +
2D Compatibility (PS) -24034 + (NN) -1772 + (LL) 2632
1D Compatibility (HY) -7600 + (ID) 2300
Total energy: -96377.0 ( -49.83 by residue)
QMean score : 0.425
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