Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKSTPHIKPMNDVEIAETVLLPGDPLRAKFIAETYLDDVEQFNTVRNMFGFTGTYKGKKVSVMGSGMGMPSIGIYSYELIHTFGCKKLIRVGSCGAMQENIDLYDVIIAQGASTDSNYVQQYQLPGHFAPIASYQLLEKAVETARDKGVRHHVGNVLSSDIFYNADTTASERWMRMGILGVEMESAALYMNAIYAGVEALGVFTVSDHLIHET--STTPEERERAFTDMIEIALSLV
3U40 Chain:A ((11-240))---TPH-NGAKYGEIAETVLMAGDPLRVKLLADTYLTDVVQYNSVRGAVGYTGYYKGVKLSVQAHGMGMPSIGIYAYELFNFYGVKRIIRIGSAGAFDESLKLGDIVIGMGACYDSNFERQYDIPGKYSCIADFQLCREAVDAAEKLGYRYKVGNIYSANYFYD-DGDHSGAWKKMGVLAVEMEAAALYMIAARARKQALCMLTISD-LCYGSGEKMTAEERRTKFTQMMEVALSL-


General information:
TITO was launched using:
RESULT:

Template: 3U40.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -166224 for 1943 contacts (-85.6/contact) +
2D Compatibility (PS) -24354 + (NN) -6278 + (LL) 828
1D Compatibility (HY) -24800 + (ID) 5950
Total energy: -226778.0 ( -116.72 by residue)
QMean score : 0.492

(partial model without unconserved sides chains):
PDB file : Tito_3U40.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3U40-query.scw
PDB file : Tito_Scwrl_3U40.pdb: