Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFIVIKIGGSTLSDMHPSIINNIKHLRSNNIYPIIVHGGGPFINEALSNQQIEPHFVNGLRVTDKATMTITKHTLIADVNTALVAQFNQHQCSAIGLCGLDAQLFEITSF-DQQYGYVGVPTALNKDALQYLCT-KFVPIINSIGFNNHDGEFYNINADTLAYFIASSLKAP-IYVLSNIAGVLINDVVIPQLPLVDIHQYIEHGDIYGGMIPKVLDAKNAIENGCPKVIIASGNKPNIIESIYNNDFVGTTILNS
3L86 Chain:A ((36-272))
KDIIVIKIGGVASQQLSGDFLSQIKNWQDAGKQLVIVHGGGFAINKLMEENQVPVKKINGLRVTSKDDMVLVSHALLDLVGKNLQEKLRQAGVSCQQLKSDIKHVVAADYLDKDTYGYVGDVTHINKRVIEEFLENRQIPILASLGYSK-EGDMLNINADYLATAVAVALAADKLILMTNVKGVLENGAVLEKITSHQVQEKIDTAVITAGMIPKIESAAKTVAAGVGQVLIGDNLLT-------------------
General information:
TITO was launched using:
RESULT:
Template:
3L86.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -192215 for 1920 contacts (-100.1/contact) +
2D Compatibility (PS) -25493 + (NN) -8548 + (LL) 1036
1D Compatibility (HY) -18800 + (ID) 3650
Total energy: -247670.0 ( -128.99 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_3L86.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L86-query.scw
PDB file :
Tito_Scwrl_3L86.pdb
: