Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYQSEYALENEMMNQLEQLGYERVTIRDNKQLLDNFRTILNERHADKLEGNPLTDKEFQRLLTMIDGKSIFESARILRDKLPLRRDDESEIYLSFLDKKSWCKNKFQVTNQVSVEDTYKARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETRYFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMAMRPYQVYAVEALIQQATETGNNGYVWHTTGSGKTLTSFKASQILSQ---QDDIKKVIFLVDRKDLDSQTEEEFNKFAKGAVDKTFNTSQLVRQLNDKSLPLIVTTIQKMAKAIQ-GNAHLLEQYKTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRCLHTYLIRDAIHDGNVLGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRHIINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTIAGIFTFKPNEDDRDGEVPYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNMFLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRVFSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAKIILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIEMMRNDTINVNYIMNILRQIDLEDKAEQRRNQEQIRRILDHADDPTLRLKRDLIREFIDNVVPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKKMIGDLPLKEKRKARKAIESFVAETTEKYGV |
| 4A2Q Chain:A ((1-791)) | -----MTADEKRSLQCYRRYIERSLNP---VYVLGNMTDWLPDELRERIRKEEERG-------------VSGAAALFLDAVLQLEARGWFRGMLDAMLAA------------------------------GYTGLAEAIENWDFSKLEKLELHRQLLKRIEATMLE-------VDPVALIPYISTCLIDRECEEIQQISENRSKAAGITKLIECLCRSDKEHWPKSLQLALDTTGYYRASELWDKARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPVYEQQKNVFKHHFERQGYSVQGISGESVEKVIEDSDIIVVTPQILVNSFEDGTLTSLSIF----TLMIFDECHNTTGNHPYNVLMTRYLEQKFNSASQLP---------------------------------QILGLTAS-VGVGNAKNIEETIEHICSLCSYLDI----QAISTVRE---NIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSETEALMRTID-----------------FGTQNYEHWIVVTQRKCRLL-------------QLEDKEEESRICRALFICTEHLRKYNDALIISEDA-RIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALSKDETNENPKLEELVCILDDAYRYNPQTRTLLFA------------------KTRALVSALKKCMEENPILNYI-----------------KPGVLDNRLLIATSVVQCNLVVLYEYSGNVTKMIQVGS---KCILVTSKTEVVENEKCNRYKEEMMNKAVEKIQK------------------------------------------------------------------------------------WDEETFAKKIHNLQMKERVL--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4A2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -1989 for 5427 contacts (-0.4/contact) +
2D Compatibility (PS) -71878 + (NN) -14726 + (LL) 16552
1D Compatibility (HY) -5600 + (ID) 3950
Total energy: -81591.0 ( -15.03 by residue)
QMean score : 0.299
|
|
|