Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MLVLNNLQKKFTN-SKMVLNNVNAKFRSGSINCIVGVNGAGKTTLLNIISSILMPTKGDVYLNSESIFENSTL-----KKEIFYTPVNPFFYENLSAKDNLYLICSLYNRKIDQITIEKTIKDVGLNI---EDLNIPVYNFSSGMKQKLNFASMLLVDSNVLLLDEPFNALDHVAQKNFTRILKGLVSKEK-IIIFTSHLPNTILELSENIYLLKDGCFTDKRKAQSFNQTTLETWLLESQKEVIPYEEK------------------------------------------------------------------------------------------------------ |
| 1OXS Chain:C ((1-352)) | MVRIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAF--PLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEINELEGKVTNEGVVIGSLRFPVSVSSDRAIIGIRPEDVKLSKDVIKDDSWILVGKGKVKVIGYQGGLFRITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDKIKVFEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OXS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133812 for 1892 contacts (-70.7/contact) +
2D Compatibility (PS) -24718 + (NN) -1845 + (LL) 260
1D Compatibility (HY) -14000 + (ID) 3200
Total energy: -177315.0 ( -93.72 by residue)
QMean score : 0.477
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