Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAFITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEGND--MDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEKI
3UWO Chain:B ((13-213))
---FVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPMAADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALESFVQGDLRPDLTLVFDLPV-------------LDRFEQEDRRFFEAVRQTYLQRAAQAPERYQVLDAGLPLAEVQAGLDRLLPNLL---
General information:
TITO was launched using:
RESULT:
Template:
3UWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73208 for 1415 contacts (-51.7/contact) +
2D Compatibility (PS) -20005 + (NN) -7773 + (LL) 1512
1D Compatibility (HY) -10000 + (ID) 3600
Total energy: -113074.0 ( -79.91 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_3UWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UWO-query.scw
PDB file :
Tito_Scwrl_3UWO.pdb
: