Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNDLKEVLLTEEDIQNICKELGAQLTKDYQ------GKPLVCVGILKGSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVYSN
4RHX Chain:D ((21-200))
---DIKSVLLTAEQIQARIAELGEQIGNDYRELSATTGQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSS----------VRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVY--
General information:
TITO was launched using:
RESULT:
Template:
4RHX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124615 for 1277 contacts (-97.6/contact) +
2D Compatibility (PS) -17381 + (NN) 256 + (LL) -32
1D Compatibility (HY) -21600 + (ID) 4100
Total energy: -167472.0 ( -131.14 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_4RHX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RHX-query.scw
PDB file :
Tito_Scwrl_4RHX.pdb
: