Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLNEIQILNNGYPMPSVGLGVYKISDEDMTKVVNAAIDAGYRAFDTAYFYDNEASLGRALKDN----GVDREDLFITTKLWNDYQGYEKTFEYFNKSIENLQTDYLDLFLIHWP------------------CEADGLFLETYKAMEELYEQGKVKAIGVCNFNVHHLEKLMAQSSIK--PMVNQIEVHPYFNQQELQEFCDRHDIKVTAWMPL---------MRNRGLLDNPVIVKIAEKYHKTPAQVVLRWHLAHNRIIIPKSQTPKRIQENIDILDFNLELTEVAEIDALDRNARQGKNPDDVKIGDLK |
| 4GQG Chain:A ((9-299)) | -------LSTKAKMPIVGLGTWKSPLGKVKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQEKIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGDDLFPKDDKGNAIGGKATFLDAWEAMEELVDEGLVKALGVSNFSHFQIEKLLNKPGLKYKPVTNQVECHPYLTQEKLIQYCHSKGITVTAYSPLGSPDRPWAKPEDPSLLEDPKIKEIAAKHKKTAAQVLIRFHIQRNVIVIPKSVTPARIVENIQVFDFKLSDEEMATILSFNRNWR-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GQG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150383 for 2133 contacts (-70.5/contact) +
2D Compatibility (PS) -28009 + (NN) -10820 + (LL) 1028
1D Compatibility (HY) -25200 + (ID) 5800
Total energy: -219184.0 ( -102.76 by residue)
QMean score : 0.561
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