Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGG-----QMANTEEVENFPGFEM-ITGPDLSTKMFEHAKKFGAVYQYGDIKSVE-DKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGA--FFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEHLNDQA |
4CCQ Chain:B ((6-312)) | ------DVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQVKTADDGYILTEGP-KTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQ------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4CCQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -153601 for 2545 contacts (-60.4/contact) +
2D Compatibility (PS) -31527 + (NN) -4713 + (LL) 1160
1D Compatibility (HY) -22800 + (ID) 6050
Total energy: -217531.0 ( -85.47 by residue)
QMean score : 0.496
|
|
|