Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVI-CAPAIQLDALTTAVKEGKAQGLEI--GAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVEDFVQLLEGAK |
4MVA Chain:A ((25-274)) | MRHPLVMGNWKLNGSRHMVHELVSNL-----RKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKVDAN-IAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -65247 for 2125 contacts (-30.7/contact) +
2D Compatibility (PS) -27001 + (NN) -11169 + (LL) -24
1D Compatibility (HY) -18000 + (ID) 5450
Total energy: -126891.0 ( -59.71 by residue)
QMean score : 0.533
|
|
|