Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MKNLVLLGGGYGNMRIMSRILTTSLPQDYTVTLVDRMPFHGLKPEFYALAAGTKSDKDVRMKFPNHPQVNTVYG-EINDIDLDAQIVSVGN-SKIDYDELIIGLGCEDKYHNVPGAEEYTHSIQTLSKARDTFHSISELPEGAKVGIVGAGLSGIELASELRESRSDLEIYLYDRGPRIL-RNFPEKLSKYVAKWFAKNNVTVVPNSNINKVEPGKIY-NCDEPKDIDLVVWTAGIQP-VEVVRNLPIDINSNGRVIVNQYHQVPTYRNVYVVGDCADLPHAP--------SAQLAEVQGDQIADVLKKQWLNEPLPD-----KMPELKVQGIVGSLGDKQGFAYIMDRTVTGRLASILKSGVLWLYKYHNG----------------------------------- |
| 1D7Y Chain:A ((5-405)) | ALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYD-RPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGA--TMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTA--GVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTRIAADMVVVGIGVLANDALARAAGLACD--DGIFVDAYGRTTC-PDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTAPGYAELPWYWSDQGALRIQVAGLASGDEEIVRGEVSLDAPKFTLIELQKGRIVGATCVNNARDFAPLRRLLAVGAKPDRAALADPATDLRKLAAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203646 for 2887 contacts (-70.5/contact) +
2D Compatibility (PS) -37720 + (NN) -16181 + (LL) 428
1D Compatibility (HY) -11200 + (ID) 3250
Total energy: -271569.0 ( -94.07 by residue)
QMean score : 0.487
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