Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSKYEPLFDKVELPNGVELRNRFVLAPLTHISSNDDGTISDVELPYIEKRSQDVGITINAASNVSDVGKAFPGQPSIAHDSDIEGLKRLATAMKKNGAKALVQIHHGGAQALPELI-PDGDVVAPSPISLKSF-----------GQKQEHSAREMTNEEIEQAIKDFGEATRRAIEAGFDGVEIHGANHYLIHQFVSPYYNRRNDVWAN----QYKFPVAVIEEVLKAKEAYGNKDFIVGYRLSPEEAESPGITMEI----TEELVNKISHMPIDYIHVSMMDTHATTREGKYAGQE-RLPLIHKWINGRMPLIGIGSIFTADEALDAVENVGVDLVAIGRELLLDYQFVEKIKDGREDEIINYFDPEREDNHHLTPNLWHQFNEGFYPLPRKDK |
2R14 Chain:A ((8-370)) | ----NPGLFTPLQL-GSLSLPNRVIMAPLTRSRT-PDSVPGRLQQIYYGQRA-SAGLIISEATNISPTARGYVYTPGIWTDAQEAGWKGVVEAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVF----GP-ERVGIRLTPFLEL-FGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPD----------TYPEGFREQMRQRF--KGGLIYCGNY-DAGRAQARLDDNTADAVAFGRPFIANPDLPERFRLGAA--LNEP----DPSTFYGG-AEVGYTDYPFLD------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R14.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139041 for 3011 contacts (-46.2/contact) +
2D Compatibility (PS) -35985 + (NN) -20771 + (LL) 780
1D Compatibility (HY) -10400 + (ID) 4250
Total energy: -209667.0 ( -69.63 by residue)
QMean score : 0.579
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