Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRQARPEDRFDIAKLVYMVWDDMELELVKHLPKDMVLDAIEKSCVDATYRTFYQHILVYEV--------ENKVAGCIISYSGENELKYEKAWELLDLPEEIKQYGTPLPVKEAKDDEYYIETIATFAAYRGRGIATKLLTSLLES---NTHVKWSLNCDINNEAALKLYKKVGFISDGQIELYKHMYHHLIVK
2B5G Chain:A ((5-151))
VIRPATAADCSDILRLIKELAKY------EQV-ILTEKDLLEDGFGEH----PFYHCLVAEVPKEHWTPEGHSIVGFAMYYFTYDP---------------------------WIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSSE-------------
General information:
TITO was launched using:
RESULT:
Template:
2B5G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64887 for 856 contacts (-75.8/contact) +
2D Compatibility (PS) -14211 + (NN) -5971 + (LL) 4660
1D Compatibility (HY) -6400 + (ID) 1500
Total energy: -88309.0 ( -103.16 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_2B5G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B5G-query.scw
PDB file :
Tito_Scwrl_2B5G.pdb
: