Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MKTTIKQAKDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSE--VDEEVFKLAKEIAQESSLYVTGTITEDNR---SDLGYEMQVKSIEVIS-------------EAHDYPITPKNHGTEFLMDHRHLWLRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAFLSQSGQLYLEAAAMA-HGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAF-TNHAESLEIQEQYVTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAIEFLK--AEGFDDIEWGEDFGAPH-------------------ETAIANHYDLPVFITNYPTKIKPFYMQPNPENEETVLCADLIAPEGYGEIIGGSERVDDLELLEQRVKEHGLDEE-----AYSYYLDLRRYGSVPHCGFGLGLERTVAWISGVEHVRETAPFPRLLNRLYP |
| 1B8A Chain:A ((1-438)) | MYRTHYSSEIT-----E-ELNG--QKVKVAGWVWEVKDLGGIKFLWIRDRDGIVQITAPK--KKVDPELFKLIPKLRSEDVVAVEGVVNFTP-KAK--LGFEILPEKIVVLNRAETPLPLDPTGK---------VKAELDTRLNNRFMDLRRPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATATEGGTELFPMKYFEEDAFLAESPQLYKEIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSIDSEMAFIEDEEEVMSFLERLVAHAINYVREHNAKELDILN--FELEEPKL-PFPRVSYDKALEILGDL-----------------GKEIPWGEDIDTEGERLLGKYMMENENAPLYFLYQYPSEAKPFYIMKYDNKPEICRAFDLEY--RGVEISSGGQREHRHDILVEQIKEK-----GLNPESFEFYLKAFRYGMPPHGGFGLGAERLIKQMLDLPNIREVILFPRDRRRLTP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146963 for 2923 contacts (-50.3/contact) +
2D Compatibility (PS) -40629 + (NN) -11908 + (LL) 1712
1D Compatibility (HY) -22800 + (ID) 6850
Total energy: -227438.0 ( -77.81 by residue)
QMean score : 0.424
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